BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H05LP1|AL427827
(974 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1876 0.0
>3x_Contig1578
Length = 13178
Score = 1876 bits (945), Expect = 0.0
Identities = 965/971 (99%), Gaps = 1/971 (0%)
Strand = Plus / Plus
Query: 1 gatcatcgacggcatatggatggaccttggctgtaaatcgtgtcgactgataacatgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 gatcatcgacggcatatggatggaccttggctgtaaatcgtgtcgactgataacatgctt 5324
Query: 61 ctcatgaaaatcaaggcttacatcatcttcgagatcagaaagtgccaattcaccatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 ctcatgaaaatcaaggcttacatcatcttcgagatcagaaagtgccaattcaccatgcca 5384
Query: 121 ttccatgttaactccacattcttgcaggtcgtccagtttcaaatagctagaaatatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5385 ttccatgttaactccacattcttgcaggtcgtccagtttcaaatagctagaaatatccag 5444
Query: 181 ctcgcagtgcattgtattgggtaaagtatattaagcttctatggtaaccagttagtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5445 ctcgcagtgcattgtattgggtaaagtatattaagcttctatggtaaccagttagtattt 5504
Query: 241 cactatcagtttttttttatgcacggtaatgaggcaaccgatagaaaaagaaagacagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5505 cactatcagtttttttttatgcacggtaatgaggcaaccgatagaaaaagaaagacagac 5564
Query: 301 aagaatatgtcaaaagcctcaaaaacgatagacctatatataagcttggtagatagcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5565 aagaatatgtcaaaagcctcaaaaacgatagacctatatataagcttggtagatagcatt 5624
Query: 361 ccacttcaaactgcatatactaaagttagataaaactagatttatcctaaaataattccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5625 ccacttcaaactgcatatactaaagttagataaaactagatttatcctaaaataattccc 5684
Query: 421 aaattaaccctaaatcatgtcatatcgtatcatgcccagttacatctagatccagaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5685 aaattaaccctaaatcatgtcatatcgtatcatgcccagttacatctagatccagaaaca 5744
Query: 481 aggtggaaacaggagttaaaacaatattgagactgggataaactaataaaactaattaac 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5745 aggtggaaacaggagtaaaaacaatattgagactgggataaactaataaaactaattaac 5804
Query: 541 tagttaattataatgcaagaatttaccagatagaaccgtagcatgaaacaagggcggtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5805 tagttaattataatgcaagaatttaccagatagaaccgtagcatgaaacaagggcggtat 5864
Query: 601 taactgtcaaaaaaataatttttttttctgatctgatttgatttaatttgatttgcagtt 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5865 taactgtaaaaaaaataatttttttttctgatctgatttgatttaatttgatttgcagtt 5924
Query: 661 tagagccaagataagacacgcgaagtgaaataagcgcaggataaattttgatttgaaggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5925 tagagccaagataagacacgcgaagtgaaataagcgcaggataaattttgatttgaaggg 5984
Query: 721 gacaaaaagcagcacagtacttaagagtgacatttcaggcgtttccgtatgcggtaacgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5985 gacaaaaagcagcacagtacttaagagtgacatttcaggcgtttccgtatgcggtaacgc 6044
Query: 781 aatataattaagacatacctatagtattagggaaaagcacgcgccttccccgctcataaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6045 aatataattaagacatacctatagtattagggaaaagcacgcgccttccccgctcataaa 6104
Query: 841 tctctgtatggcgtmg-gaaactttacattgtttgaacaatttttttattccgtttagta 899
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6105 tctctgtatggcgtagcggaactttacattgtttgaacaatttttttattccgtttagta 6164
Query: 900 tagagcctcacccctgggaacattctctacagttatgtgcatatttcagggggagctgat 959
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6165 tagagcctcacccctgggaacattctctacagtaatgtgcatatttcagggggagctgat 6224
Query: 960 cttacattgag 970
|||||||||||
Sbjct: 6225 cttacattgag 6235
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8374
Number of Sequences: 1807
Number of extensions: 8374
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)